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AAB | Articles | Volume 61, issue 4
Arch. Anim. Breed., 61, 441-449, 2018
https://doi.org/10.5194/aab-61-441-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.
Arch. Anim. Breed., 61, 441-449, 2018
https://doi.org/10.5194/aab-61-441-2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.

Original study 12 Nov 2018

Original study | 12 Nov 2018

Polymorphisms in pattern recognition receptor genes of indigenous and White Leghorn breeds of chicken

Santosh Haunshi et al.
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Cited articles  
Besbes, B.: Genotype evaluation and breeding of poultry for performance under sub-optimal village conditions, World's Poult. Sci. J., 65, 260–271, 2009. 
Branković, I., van Ess, E. F., Noz, M. P., Wiericx, W. A., Spaargaren, J., Morré, S. A., and Ouburg, S.: NOD1 in contrast to NOD2 functional polymorphism influence Chlamydia trachomatis infection and the risk of tubal factor infertility, Pathog. Dis., 73, 1–9, 2015. 
Chen, S., Cheng, A., and Wang, M.: Innate sensing of viruses by pattern recognition receptors in birds, Vet. Res., 44, 1–12, https://doi.org/10.1186/1297-9716-44-82, 2013. 
Downing, T., Lloyd, A. T., O'Farrelly, C., and Bradley, D. G.: The differential evolutionary dynamics of avian cytokine and TLR gene classes, J. Immunol., 184, 6993–7000, 2010. 
Fan, Y., Roy, S., Mukhopadhyay, R., Kapoor, A., Priya, D., Wojcik, G. L., Pass, R. F., and Arav-Boger, R.: Role of nucleotide-binding oligomerization domain 1 (NOD1) and its variants in human cytomegalovirus control in vitro and in vivo, P. Natl. Acad. Sci. USA, 113, E7818–E7827, 2016. 
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Short summary
Substitution of amino acids due to single nucleotide polymorphisms (SNPs) in pattern recognition receptors leads to altered innate immunity to diseases. The present study shows extensive polymorphisms in coding sequences of TLR (TLR3, TLR1LA) and NLR (NOD1) genes compared to the RLR (MDA5, LGP2) gene. SNPs were higher in Indian chicken breeds (Ghagus and Nicobari) compared to the WLH breed. A computer simulation study revealed a neutral effect of most non-synonymous SNPs on protein function.
Substitution of amino acids due to single nucleotide polymorphisms (SNPs) in pattern recognition...
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